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For Academics

Save a plot

It is useful to save R graphics with code, so the file creation and naming can be automated.

On a mac, hitting Cmd-S when a graph is displayed will save a pdf. However exporting to pdf (or other formats) using code gives more control. For example Cmd-S will save to the displayed dimensions of a canvas, which is a problem if a canvas contains many graphs because they may not b resolved well. A larger canvas can be defined for export.

pdf(file='1.pdf', width=15, height=18, pointsize=20)
par(mfrow=c(4,4)) #define columns and rows on canvas, each gets a graph
# code for graphs goes here
dev.off()

There are many more options, explored them with ?pdf

3D graphs are exported using:

rgl.snapshot("/Users/username/Desktop/graphName.png")
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Sex chromosome papers RSS


Transposable element expression is associated with sex chromosome number in humans
Link

Best practices for improving alignment and variant calling on human sex chromosomes
Link

Satellite DNA Mapping in Suliformes (Aves): Insights into the Evolution of the Multiple Sex Chromosome System in Sula spp
Link